RAB31

Protein-coding gene in the species Homo sapiens
RAB31
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2FG5

Identifiers
AliasesRAB31, Rab22B, member RAS oncogene family
External IDsOMIM: 605694; MGI: 1914603; HomoloGene: 5001; GeneCards: RAB31; OMA:RAB31 - orthologs
Gene location (Human)
Chromosome 18 (human)
Chr.Chromosome 18 (human)[1]
Chromosome 18 (human)
Genomic location for RAB31
Genomic location for RAB31
Band18p11.22Start9,708,275 bp[1]
End9,862,551 bp[1]
Gene location (Mouse)
Chromosome 17 (mouse)
Chr.Chromosome 17 (mouse)[2]
Chromosome 17 (mouse)
Genomic location for RAB31
Genomic location for RAB31
Band17|17 E1.1Start65,958,724 bp[2]
End66,079,747 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • dorsal motor nucleus of vagus nerve

  • trabecular bone

  • internal globus pallidus

  • periodontal fiber

  • inferior olivary nucleus

  • saphenous vein

  • visceral pleura

  • optic nerve

  • tendon of biceps brachii

  • monocyte
Top expressed in
  • cumulus cell

  • granulocyte

  • endothelial cell of lymphatic vessel

  • stroma of bone marrow

  • barrel cortex

  • substantia nigra

  • ankle joint

  • calvaria

  • decidua

  • semi-lunar valve
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
  • nucleotide binding
  • GDP binding
  • GTP binding
  • GTPase activity
  • protein binding
Cellular component
  • endosome
  • phagocytic vesicle membrane
  • Golgi apparatus
  • trans-Golgi network membrane
  • membrane
  • early endosome
  • phagocytic vesicle
  • cytoplasmic vesicle
  • cytosol
  • plasma membrane
  • secretory granule membrane
  • early endosome membrane
  • phagocytic cup
  • early phagosome membrane
Biological process
  • receptor internalization
  • phagosome maturation
  • cellular response to insulin stimulus
  • regulated exocytosis
  • Golgi to plasma membrane protein transport
  • neutrophil degranulation
  • intracellular protein transport
  • Rab protein signal transduction
  • positive regulation of phagocytosis, engulfment
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

11031

106572

Ensembl

ENSG00000168461

ENSMUSG00000056515

UniProt

Q13636

Q921E2

RefSeq (mRNA)

NM_006868

NM_133685

RefSeq (protein)

NP_006859

NP_598446

Location (UCSC)Chr 18: 9.71 – 9.86 MbChr 17: 65.96 – 66.08 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Ras-related protein Rab-31 is a protein that in humans is encoded by the RAB31 gene.[5][6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000168461 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000056515 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Chen D, Guo J, Miki T, Tachibana M, Gahl WA (September 1996). "Molecular cloning of two novel rab genes from human melanocytes". Gene. 174 (1): 129–34. doi:10.1016/0378-1119(96)00509-4. PMID 8863739.
  6. ^ "Entrez Gene: RAB31 RAB31, member RAS oncogene family".

Further reading

  • Ng EL, Wang Y, Tang BL (September 2007). "Rab22B's role in trans-Golgi network membrane dynamics". Biochemical and Biophysical Research Communications. 361 (3): 751–7. doi:10.1016/j.bbrc.2007.07.076. PMID 17678623.
  • Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M (November 2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983. S2CID 7827573.
  • Brandenberger R, Wei H, Zhang S, Lei S, Murage J, Fisk GJ, Li Y, Xu C, Fang R, Guegler K, Rao MS, Mandalam R, Lebkowski J, Stanton LW (June 2004). "Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation". Nature Biotechnology. 22 (6): 707–16. doi:10.1038/nbt971. PMID 15146197. S2CID 27764390.
  • Bao X, Faris AE, Jang EK, Haslam RJ (January 2002). "Molecular cloning, bacterial expression and properties of Rab31 and Rab32". European Journal of Biochemistry. 269 (1): 259–71. doi:10.1046/j.0014-2956.2001.02645.x. PMID 11784320.
  • Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, Suyama A, Sugano S (October 1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
  • Bonaldo MF, Lennon G, Soares MB (September 1996). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Research. 6 (9): 791–806. doi:10.1101/gr.6.9.791. PMID 8889548.
  • Maruyama K, Sugano S (January 1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
  • Osaka N (August 1975). "Target size and luminance in apparent brightness of the peripheral visual field". Perceptual and Motor Skills. 41 (1): 49–50. doi:10.2466/pms.1975.41.1.49. PMID 1178432. S2CID 11871373.
  • v
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  • 2fg5: Crystal structure of human RAB31 in complex with a GTP analogue
    2fg5: Crystal structure of human RAB31 in complex with a GTP analogue


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