SPTLC2

Serinska palmitoiltransferaza, dugolančana bazna podjedinica 2
Identifikatori
Simboli SPTLC2; HSN1C; LCB2; LCB2A; NSAN1C; SPT2; hLCB2a
Vanjski ID OMIM: 605713 MGI: 108074 HomoloGene: 21610 GeneCards: SPTLC2 Gene
EC broj 2.3.1.50
Ontologija gena
Molekularna funkcija aktivnost serinske C-palmitoiltransferaze
proteinsko vezivanje
piridoksal fosfatno vezivanje
Celularna komponenta membrana endoplazmatičnog retikuluma
integralno sa membranom
serinski C-palmitoiltransferazni kompleks
SPOTS kompleks
Biološki proces sfingolipidni metabolički proces
sfingomijelinski biosintetički proces
Pregled RNK izražavanja
podaci
Ortolozi
Vrsta Čovek Miš
Entrez 9517 20773
Ensembl ENSG00000100596 ENSMUSG00000021036
UniProt O15270 P97363
RefSeq (mRNA) NM_004863 NM_011479
RefSeq (protein) NP_004854 NP_035609
Lokacija (UCSC) Chr 14:
77.97 - 78.08 Mb
Chr 12:
87.31 - 87.39 Mb
PubMed pretraga [1] [2]

Serinska palmitoiltransferaza, dugolančana bazna podjedinica 2 (SPTLC2) protein je koji je čoveka kodiran SPTLC2 genom.[1][2][3]

Ovaj gen kodira dugolančanu baznu podjedinicu serinske palmitoiltransferaze. Serinska palmitoiltransferaza, koja se sastoji od dve različite podjedinice, je inicijalni enzim u sfingolipidnoj biosintezi. Ona katalizuje piridoksal 5'-fosfat zavisnu kondenzaciju L-serina i palmitoil KoA do 3-oksosfinganina. Mutacije ovog gene su identifikovane kod pacijenata sa naslednom senzornom neuropatijom tipa I. Alternativno splajsovane varijante koje kodiraju različite izoforme su poznate.[1]

Reference

  1. ^ а б „Entrez Gene: SPTLC2 serine palmitoyltransferase, long chain base subunit 2”. 
  2. ^ Nagiec MM, Lester RL, Dickson RC (1996). „Sphingolipid synthesis: identification and characterization of mammalian cDNAs encoding the Lcb2 subunit of serine palmitoyltransferase”. Gene. 177 (1–2): 237—41. PMID 8921873. doi:10.1016/0378-1119(96)00309-5. 
  3. ^ Weiss B, Stoffel W (1997). „Human and murine serine-palmitoyl-CoA transferase--cloning, expression and characterization of the key enzyme in sphingolipid synthesis”. Eur. J. Biochem. 249 (1): 239—47. PMID 9363775. doi:10.1111/j.1432-1033.1997.00239.x. 

Literatura

  • Takeda J; Yano H; Eng S; et al. (1994). „A molecular inventory of human pancreatic islets: sequence analysis of 1000 cDNA clones”. Hum. Mol. Genet. 2 (11): 1793—8. PMID 7506601. doi:10.1093/hmg/2.11.1793. 
  • Hillier LD; Lennon G; Becker M; et al. (1997). „Generation and analysis of 280,000 human expressed sequence tags”. Genome Res. 6 (9): 807—28. PMID 8889549. doi:10.1101/gr.6.9.807. 
  • Nagiec MM, Lester RL, Dickson RC (1996). „Sphingolipid synthesis: identification and characterization of mammalian cDNAs encoding the Lcb2 subunit of serine palmitoyltransferase”. Gene. 177 (1–2): 237—41. PMID 8921873. doi:10.1016/0378-1119(96)00309-5. 
  • Weiss B, Stoffel W (1997). „Human and murine serine-palmitoyl-CoA transferase--cloning, expression and characterization of the key enzyme in sphingolipid synthesis”. Eur. J. Biochem. 249 (1): 239—47. PMID 9363775. doi:10.1111/j.1432-1033.1997.00239.x. 
  • Nagase T; Ishikawa K; Miyajima N; et al. (1998). „Prediction of the coding sequences of unidentified human genes. IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro”. DNA Res. 5 (1): 31—9. PMID 9628581. doi:10.1093/dnares/5.1.31. 
  • Hanada K, Hara T, Nishijima M (2000). „Purification of the serine palmitoyltransferase complex responsible for sphingoid base synthesis by using affinity peptide chromatography techniques”. J. Biol. Chem. 275 (12): 8409—15. PMID 10722674. doi:10.1074/jbc.275.12.8409. 
  • Dias Neto E; Correa RG; Verjovski-Almeida S; et al. (2000). „Shotgun sequencing of the human transcriptome with ORF expressed sequence tags”. Proc. Natl. Acad. Sci. U.S.A. 97 (7): 3491—6. PMC 16267 Слободан приступ. PMID 10737800. doi:10.1073/pnas.97.7.3491. 
  • Dawkins JL; Brahmbhatt S; Auer-Grumbach M; et al. (2002). „Exclusion of serine palmitoyltransferase long chain base subunit 2 (SPTLC2) as a common cause for hereditary sensory neuropathy”. Neuromuscul. Disord. 12 (7–8): 656—8. PMID 12207934. doi:10.1016/S0960-8966(02)00015-9. 
  • Stachowitz S; Alessandrini F; Abeck D; et al. (2003). „Permeability barrier disruption increases the level of serine palmitoyltransferase in human epidermis”. J. Invest. Dermatol. 119 (5): 1048—52. PMID 12445191. doi:10.1046/j.1523-1747.2002.19524.x. 
  • Strausberg RL; Feingold EA; Grouse LH; et al. (2003). „Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences”. Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899—903. PMC 139241 Слободан приступ. PMID 12477932. doi:10.1073/pnas.242603899. 
  • Heilig R; Eckenberg R; Petit JL; et al. (2003). „The DNA sequence and analysis of human chromosome 14”. Nature. 421 (6923): 601—7. PMID 12508121. doi:10.1038/nature01348. 
  • Gerhard DS; Wagner L; Feingold EA; et al. (2004). „The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)”. Genome Res. 14 (10B): 2121—7. PMC 528928 Слободан приступ. PMID 15489334. doi:10.1101/gr.2596504. 
  • Rual JF; Venkatesan K; Hao T; et al. (2005). „Towards a proteome-scale map of the human protein-protein interaction network”. Nature. 437 (7062): 1173—8. PMID 16189514. doi:10.1038/nature04209. 
  • Olsen JV; Blagoev B; Gnad F; et al. (2006). „Global, in vivo, and site-specific phosphorylation dynamics in signaling networks”. Cell. 127 (3): 635—48. PMID 17081983. doi:10.1016/j.cell.2006.09.026. 
  • Chen M; Han G; Dietrich CR; et al. (2007). „The Essential Nature of Sphingolipids in Plants as Revealed by the Functional Identification and Characterization of the Arabidopsis LCB1 Subunit of Serine Palmitoyltransferase”. Plant Cell. 18 (12): 3576—93. PMC 1785403 Слободан приступ. PMID 17194770. doi:10.1105/tpc.105.040774. 
  • Hornemann T, Wei Y, von Eckardstein A (2007). „Is the mammalian serine palmitoyltransferase a high-molecular-mass complex?”. Biochem. J. 405 (1): 157—64. PMC 1925250 Слободан приступ. PMID 17331073. doi:10.1042/BJ20070025. 
  • Nicholas C. Price; Lewis Stevens (1999). Fundamentals of Enzymology: The Cell and Molecular Biology of Catalytic Proteins (Third изд.). USA: Oxford University Press. ISBN 019850229X. 
  • Eric J. Toone (2006). Advances in Enzymology and Related Areas of Molecular Biology, Protein Evolution (Volume 75 изд.). Wiley-Interscience. ISBN 0471205036. 
  • Branden C; Tooze J. Introduction to Protein Structure. New York, NY: Garland Publishing. ISBN 0-8153-2305-0. 
  • Irwin H. Segel. Enzyme Kinetics: Behavior and Analysis of Rapid Equilibrium and Steady-State Enzyme Systems (Book 44 изд.). Wiley Classics Library. ISBN 0471303097. 
  • William P. Jencks (1987). Catalysis in Chemistry and Enzymology. Dover Publications. ISBN 0486654605. 

Spoljašnje veze

  • p
  • r
  • u
2.3.1: osim amino-acilne grupe2.3.2: Aminoaciltransferaze2.3.3: konverzija u alkil pri transferu
B enzm: 1.1/2/3/4/5/6/7/8/10/11/13/14/15-18, 2.1/2/3/4/5/6/7/8, 2.7.10, 2.7.11-12, 3.1/2/3/4/5/6/7, 3.1.3.48, 3.4.21/22/23/24, 4.1/2/3/4/5/6, 5.1/2/3/4/99, 6.1-3/4/5-6